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The Lake Superior - North Watershed covers over 1 million acres in the Northern Lakes and Forest ecoregion.
Partnerships and diversified funding drive the work to restore water quality in impaired streams in the Red Lake River Watershed through science-based interventions.
The Lower Rainy River Watershed is composed of a conglomeration of tributaries to the Rainy River, from International Falls and west to the Rainy River's pour point at the Lake of the Woods.
The Cedar River Watershed in Minnesota encompasses 454,029 acres in Mower, Freeborn, Dodge, and Steele counties. This watershed covers prime agricultural land with many streams and drainage ditches flowing into the river.
The Watershed Pollutant Load Monitoring Network (WPLMN) is a partnership that collects data on water quality and flow in Minnesota.
The Crow Wing River Watershed is located in north-central Minnesota and covers approximately 1,946 square miles within the counties of Becker, Cass, Clearwater, Crow Wing, Hubbard, Morrison, Otter Tail, Todd, and Wadena.
The Cannon River Watershed is located south of the Twin Cities and encompasses areas of Dakota, Goodhue, Le Sueur, Steele, Rice and Waseca counties.
The Rock River watershed covers more than 1 million acres in Rock, Nobles, Pipestone and Murray counties in southwestern Minnesota. It is the largest of the four watersheds in Minnesota that are part of the Missouri River Basin, extending south into Iowa.
The Minnesota River - Mankato Watershed covers 861,886 acres across Cottonwood, Brown, Redwood, Renville, Sibley, Nicollet, Blue Earth, and Le Sueur counties in south-central Minnesota.
Ten TMDL projects undertaken in the Lower St. Croix River Watershed to address nutrient, biota, bacteria, and other impairments.
The Mississippi River - Headwaters Watershed consists of 1.26 million acres (1,961 square miles) and contains the headwaters of the Mississippi River at Lake Itasca in Itasca State Park. The watershed includes parts of Becker, Beltrami, Cass, Clearwater, Hubbard and Itasca counties.
Water scientists from the MPCA published four watershed reports in 2025, updating the data we need to keep Minnesota’s waters clean and protected.
The Upper/Lower Red Lake Watershed covers more than 1.2 million acres and is home to Upper and Lower Red Lakes, the two largest bodies of water within the state.
The Minnesota River - Yellow Medicine River Watershed (1.3 million acres) has traditionally been managed as two separate watersheds, the Hawk Creek Watershed to the north of the Minnesota River and the Yellow Medicine River Watershed to the south.
The MPCA uses the Environmental Quality Information System (EQuIS) to store water quality data from more than 17,000 Minnesota sampling locations.
The Mississippi River - Sartell Watershed covers approximately 652,800 acres (1,020 sq. miles) in the central part of the Upper Mississippi River Basin. The watershed includes parts of Benton, Crow Wing, Mille Lacs, Morrison, Stearns, and Todd counties.
A new planning effort in northwest Minnesota takes a basin-wide approach to reducing the state's phosphorous contributions to the Red River, and to Canada's Lake Winnipeg.
The Big Fork River Watershed covers more than 1.3 million acres that include some of the state’s most pristine wilderness. The river flows north 165 miles from Dora Lake (45 miles northeast of Bemidji in north-central Itasca County) to the Rainy River, which forms the Minnesota-Canada border.
Removing of an old dam and restoring a creek's curves are improving habitat and water quality in the Pomme de Terre River Watershed.
The Wild Rice River begins its course at Mud Lake in Minnesota's Clearwater County, and flows largely to the west through Norman and Mahnomen counties.